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Surname : GUÉGAN
Name : Jean-François
Team : EEPI
Grade : DRCE
Email address : This email address is being protected from spambots. You need JavaScript enabled to view it.
Telephone : (+33) 4 67 41 62 05
Fax : (+33) 4 67 41 62 99
Office : 352
Locality : IRD Montpellier
Employer : IRD
Theme : Ecology of infectious diseases, environmental health, dynamics of ecosystems and health

Publications :

Ezanno P, Picault S, Winter N, Beaunee G, Monod H, Guégan JF (2020) Artificial intelligence and animal health. INRA Productions Animales 33: 95-108 doi

Guégan JF, Ayouba A, Cappelle J, de Thoisy B (2020) Forests and emerging infectious diseases: unleashing the beast within. Environmental Research Letters 15: 083007 doi

Le Turnier P, Leport C, Martin P, Jadand C, Hoen B, Guégan JF (2020) Multi-sectorial research is paramount for preventing and controlling emerging infectious diseases. Revue D Epidemiologie Et De Sante Publique 68: 133-136 doi

Mazamay S, Bompangue D, Guégan JF, Muyembe JJ, Raoul F, Broutin H (2020) Understanding the spatio-temporal dynamics of meningitis epidemics outside the belt: the case of the Democratic Republic of Congo (DRC). BMC Infectious Diseases 20: 291 doi

Mazamay S, Broutin H, Bompangue D, Muyembe JJ, Guégan JF (2020) The environmental drivers of bacterial meningitis epidemics in the Democratic Republic of Congo, Central Africa. PLoS Neglected Tropical Diseases 14: e0008634 doi

Roche B, Garchitorena A, Guégan JF, Arnal A, Roiz D, Morand S, Zambrana-Torrelio C, Suzan G, Daszak P (2020) Was the COVID-19 pandemic avoidable? A call for a "solution-oriented" approach in pathogen evolutionary ecology to prevent future outbreaks. Ecology Letters 23: 1557-1560 doi

White PCL, Guégan JF, Keune H, De Bell S, Geijzendorffer IR, Hermans CML, Prieur-Richard AH, Iroegbu C, Stone D, Vanwambeke S, de Vries S, Ford A, Graham H (2020) Integrative policy development for healthier people and ecosystems: A european case analysis. Area 52: 495-504 doi

Chavy A, Nava AFD, Luz SLB, Ramirez JD, Herrera G, dos Santos TV, Ginouves M, Demar M, Prevot G, Guégan JF, de Thoisy B (2019) Ecological niche modelling for predicting the risk of cutaneous leishmaniasis in the Neotropical moist forest biome. PLoS Neglected Tropical Diseases 13: e0007629 doi

Guégan JF, de Thoisy B, Ayouba A, Cappelle J (2019) Tropical forests, changes in land uses and emerging infectious hazards. Santé Publique 31: 91-106 doi

Le Tyrant M, Bley D, Leport C, Alfandari S, Guégan JF (2019) Low to medium-low risk perception for dengue, chikungunya and Zika outbreaks by infectious diseases physicians in France, Western Europe. BMC Public Health 19: 1014 doi

Sanhueza D, Guégan JF, Jordan H, Chevillon C (2019) Environmental variations in Mycobacterium ulcerans transcriptome: absence of mycolactone expression in suboptimal environments. Toxins 11: 146 doi

Abbate JL, Ezenwa VO, Guégan JF, Choisy M, Nacher M, Roche B (2018) Disentangling complex parasite interactions: protection against cerebral malaria by one helminth species is jeopardized by co-infection with another. PLoS Neglected Tropical Diseases 12: e0006483 doi

Barnabe C, Breniere SF, Guégan JF, Blanchet D, Aznar C (2018) Molecular characterization of Rhodnius robustus specimens, potential vectors for Chagas disease in French Guiana, South America. Infection, Genetics and Evolution 59: 28-31 doi

Burdet C, Guégan JF, Duval X, Le Tyrant M, Bergeron H, Manuguerra JC, Raude J, Leport C, Zylberman P (2018) Need for integrative thinking to fight against emerging infectious diseases. Proceedings of the 5th seminar on emerging infectious diseases, March 22, 2016-current trends and proposals. Revue D Epidemiologie Et De Sante Publique 66: 81-90 doi

Garchitorena A, Bonds MH, Guégan JF, Roche B (2018) Interactions between ecological and socio-economic drivers of Buruli ulcer burden in Sub-Saharan Africa: opportunities for an improved control. In, Ecology and Evolution of Infectious Diseases: Pathogen Control and Public Health Management in Low-Income Countries. B Roche, H Broutin & F Simard (Eds.) Oxford University Press, New York. pp 217-235 doi

Jacqueline C, Abbate JL, Sorci G, Guégan JF, Thomas F, Roche B (2018) The macroecology of cancer incidences in humans is associated with large-scale assemblages of endemic infections. Infection, Genetics and Evolution 61: 189-196 doi

Murray KA, Olivero J, Roche B, Tiedt S, Guégan JF (2018) Pathogeography: leveraging the biogeography of human infectious diseases for global health management. Ecography 41: 1411-1427 doi

Sanhueza D, Chevillon C, Bouzinbi N, Godreuil S, Guégan JF (2018) Chitin increases Mycobacterium ulcerans growth in acidic environments. Microbes and Environments 33: 234-237 doi

Combe M, Velvin CJ, Morris A, Garchitorena A, Carolan K, Sanhueza D, Roche B, Couppie P, Guégan JF, Gozlan RE (2017) Global and local environmental changes as drivers of Buruli ulcer emergence. Emerging Microbes & Infections 6: e22 doi

Douine M, Gozlan R, Nacher M, Dufour J, Reynaud Y, Elguero E, Combe M, Velvin CJ, Chevillon C, Berlioz-Arthaud A, Labbé S, Sainte-Marie D, Guégan JF, Pradinaud R, Couppié P (2017) Mycobacterium ulcerans infection (Buruli ulcer) in French Guiana, South America, 1969–2013: an epidemiological study. The Lancet Planetary Health 1: e65-e73 doi

Ebong SMA, Garcia-Pena GE, Pluot-Sigwalt D, Marsollier L, Le Gall P, Eyangoh S, Guégan JF (2017) Ecology and feeding habits drive infection of water bugs with Mycobacterium ulcerans. Ecohealth 14: 329-341 doi

Garchitorena A, Sokolow SH, Roche B, Ngonghala CN, Jocque M, Lund A, Barry M, Mordecai EA, Daily GC, Jones JH, Andrews JR, Bendavid E, Luby SP, LaBeaud AD, Seetah K, Guégan JF, Bonds MH, De Leo G (2017) Disease ecology, health and the environment: a framework to account for ecological and socio-economic drivers in the control of neglected tropical diseases. Philosophical Transactions of the Royal Society B: Biological Sciences 372: 20160128 doi

Hosseini PR, Mills JN, Prieur-Richard AH, Ezenwa VO, Bailly X, Rizzoli A, Suzan G, Vittecoq M, Garcia-Pena GE, Daszak P, Guégan JF, Roche B (2017) Does the impact of biodiversity differ between emerging and endemic pathogens? the need to separate the concepts of hazard and risk. Philosophical Transactions of the Royal Society B: Biological Sciences 372: 20160129 doi

Ebong SMA, Petit E, Le Gall P, Chen PP, Nieser N, Guilbert E, Njiokou F, Marsollier L, Guégan JF, Pluot-Sigwalt D, Eyangoh S, Harry M (2016) Molecular species delimitation and morphology of aquatic and sub-aquatic bugs (Heteroptera) in Cameroon. PLoS One 11: e0154905 doi

García-Peña GE, Garchitorena A, Carolan K, Canard E, Prieur-Richard AH, Suzán G, Mills JN, Roche B, Guégan JF (2016) Niche-based host extinction increases prevalence of an environmentally acquired pathogen. Oikos 125: 1508-1515 doi

Guégan JF, Zylberman P, Le Tyrant M, Che D, Bergeron H, Meynard JB, Leport C, Steering Comm 4th Val-de-Grace's S (2016) Proceedings of the 4th school of Val-de-Grace's seminar on emerging infectious diseases. Current trends and proposals, March 2015, 25th. Medecine Et Maladies Infectieuses 46: 333-341 doi

Jean K, Burnside WR, Carlson L, Smith K, Guégan JF (2016) An equilibrium theory signature in the island biogeography of human parasites and pathogens. Global Ecology and Biogeography 25: 107-116 doi

Morris A, Guégan JF, Benbow ME, Williamson H, Small PLC, Quaye C, Boakye D, Merritt RW, Gozlan RE (2016) Functional diversity as a new framework for understanding the ecology of an emerging generalist pathogen. Ecohealth 13: 570-581 doi

Sanhueza D, Chevillon C, Colwell R, Babonneau J, Marion E, Marsollier L, Guégan JF (2016) Chitin promotes Mycobacterium ulcerans growth. Fems Microbiology Ecology 92: fiw067 doi

Ezenwa VO, Prieur-Richard AH, Roche B, Bailly X, Becquart P, García-Peña GE, Hosseini PR, Keesing F, Rizzoli A, Suzán G, Vignuzzi M, Vittecoq M, Mills JN, Guégan JF (2015) Interdisciplinarity and infectious diseases: an Ebola case study. PLoS Pathogens 11: e1004992 doi

Flahault A, Schutte S, Guégan JF, Pascal M, Barouki R (2015) Health can help saving negotiation on climate change. Lancet 385: E49-E50 doi

Garchitorena A, Guégan JF, Leger L, Eyangoh S, Marsollier L, Roche B (2015) Mycobacterium ulcerans dynamics in aquatic ecosystems are driven by a complex interplay of abiotic and biotic factors. Elife 4: e07616 doi

Garchitorena A, Ngonghala CN, Guégan JF, Texier G, Bellanger M, Bonds M, Roche B (2015) Economic inequality caused by feedbacks between poverty and the dynamics of a rare tropical disease: the case of Buruli ulcer in sub-Saharan Africa. Proceedings of the Royal Society of London, Series B 282: 20151426 doi

Garchitorena A, Ngonghala CN, Texier G, Landier J, Eyangoh S, Bonds MH, Guégan JF, Roche B (2015) Environmental transmission of Mycobacterium ulcerans drives dynamics of Buruli ulcer in endemic regions of Cameroon. Scientific Reports 5: 18055 doi

Landier J, Constantin de Magny G, Garchitorena A, Guégan JF, Gaudart J, Marsollier L, Le Gall P, Giles-Vernick T, Eyangoh S, Fontanet A, Texier G (2015) Seasonal patterns of Buruli ulcer incidence, Central Africa, 2002-2012. Emerging Infectious Diseases 21: 1414-1417 doi

Roche B, Morand S, Elguero E, Balenghien T, Guégan JF, Gaidet N (2015) Does host receptivity or host exposure drives dynamics of infectious diseases? The case of West Nile virus in wild birds. Infection, Genetics and Evolution 33: 11-19 doi

Suzán G, Garcia-Peña GE, Castro-Arellano I, Rico O, Rubio AV, Tolsá MJ, Roche B, Hosseini PR, Rizzoli A, Murray KA, Zambrana-Torrelio C, Vittecoq M, Bailly X, Aguirre AA, Daszak P, Prieur-Richard AH, Mills JN, Guégan JF (2015) Metacommunity and phylogenetic structure determine wildlife and zoonotic infectious disease patterns in time and space. Ecology and Evolution. 5: 865-873. doi

Zogo B, Djenontin A, Carolan K, Babonneau J, Guégan JF, Eyangoh S, Marion E (2015) A field study in Benin to investigate the role of mosquitoes and other flying insects in the ecology of Mycobacterium ulcerans. PLoS Neglected Tropical Diseases 9: e0003941 doi

Garchitorena A, Roche B, Kamgang R, Ossomba J, Babonneau J, Landier J, Fontanet A, Flahault A, Eyangoh S, Guégan JF & Marsollier L (2014) Mycobacterium ulcerans ecological dynamics and its association with freshwater ecosystems and aquatic communities: results from a 12-month environmental survey in Cameroon. PLoS Neglected Tropical Diseases. 8: 2879 doi

Hanf M, Guégan JF, Ahmed I & Nacher M (2014) Disentangling the complexity of infectious diseases: Time is ripe to improve the first-line statistical toolbox for epidemiologists. Infection, Genetics and Evolution. 21: 497-505 doi

Landier J, Gaudart J, Carolan K, Lo Seen D, Guégan JF, Eyangoh S, Fontanet A & Texier G (2014) Spatio-temporal patterns and landscape-associated risk of Buruli ulcer in Akonolinga, Cameroon. PLoS Neglected Tropical Diseases. 8: doi

Leport C, Zylberman P, Guégan JF, Bricaire F, Cavallo JD, Che D, Eliaszewicz M & Moatti JP (2014) Proceedings of the 2nd seminar on emerging infectious diseases, December 7, 2012-Current trends and proposals. Revue d Epidémiologie et de Santé Publique. 62: 153-158 doi

Morris A, Gozlan R, Marion E, Marsollier L, Andreou D, Sanhueza D, Ruffine R, Couppie P & Guégan JF (2014) First detection of Mycobacterium ulcerans DNA in environmental samples from South America. PLoS Neglected Tropical Diseases. 8: doi

Morris A, Gozlan RE, Hassani H, Andreou D, Couppie P & Guégan JF (2014) Complex temporal climate signals drive the emergence of human water-borne disease. Emerging Microbes & Infections. 3: doi

Sambourg E, Dufour J, Edouard S, Morris A, Mosnier E, Reynaud Y, Sainte-Marie D, Nacher M, Guégan JF & Couppie P (2014) Paradoxical reactions and responses during antibiotic treatment for Mycobacterium ulcerans infection (Buruli ulcer). Four cases from French Guiana. Annales De Dermatologie Et De Venereologie. 141: 413-418 doi

Roche B, Benbow ME, Merritt R, Kimbirauskas R, McIntosh M, Small PLC, Williamson H & Guégan JF (2013) Identifying the Achilles heel of multi-host pathogens: the concept of keystone 'host' species illustrated by Mycobacterium ulcerans transmission. Environmental Research Letters. 8: 7 doi

Roche B, Rohani P, Dobson AP & Guégan JF (2013) The impact of community organization on vector-borne pathogens. American Naturalist. 181: 1-11 doi

Andreou D, Arkush KD, Guégan JF & Gozlan RE (2012) Introduced pathogens and native freshwater biodiversity: A case study of Sphaerothecum destruens. PLoS One. 7: e36998 doi

Ebong SMA, Eyangoh S, Marion E, Landier J, Marsollier L, Guégan JF & Legall P (2012) Survey of water bugs in Bankim, a new Buruli ulcer endemic area in Cameroon. Journal of Tropical Medicine. 123843 doi

Jean K & Guégan JF (2012) Ecologie de la santé : un appui aux politiques internationales de surveillance du risque infectieux. Cahier de la sécurité. 20: 157-160

Leport C, Guégan JF, Zylberman P, Bitar D, Bricaire F, Cavallo JD, Eliaszewicz M & Moatti JP (2012) Proceedings of the seminar on Emerging Infectious Diseases, November 9, 2011: Current trends and proposals. Médecine et Maladies Infectieuses. 42: 569-573 doi

Roche B, Dobson AP, Guégan JF & Rohani P (2012) Linking community and disease ecology: the impact of biodiversity on pathogen transmission. Philosophical Transactions of the Royal Society B: Biological Sciences. 367: 2807-2813 doi

Soti V, Tran A, Degenne P, Chevalier V, Lo Seen D, Thiongane Y, Diallo M, Guégan JF & Fontenille D (2012) Combining hydrology and mosquito population models to identify the drivers of Rift Valley fever emergence in semi-arid regions of West Africa. PLoS Neglected Tropical Diseases. 6: e1795 doi

Thomas F, Guégan JF & Renaud F (2012) Ecologie et évolution des systèmes parasites. De Boeck.

Bordes F, Guégan JF & Morand S (2011) Microparasite species richness in rodents is higher at lower latitudes and is associated with reduced litter size. Oikos. 120: 1889-1896 doi

Guégan JF (2011) Book review of The Biogeography of Host-Parasite interactions by Serge Morand and Boris R Krasnov. Parasites & Vectors. 4: 34 pdf

Leport C & Guégan JF (2011) Les maladies infectieuses émergentes : état de la situation et perspectives. Actualité et dossier en santé publique. 76: 4-6

Roche B & Guégan JF (2011) Ecosystem dynamics, biological diversity and emerging infectious diseases. Comptes Rendus Biologies. 334: 385-392 doi pdf

Smith KF & Guégan JF (2010) Changing geographic distributions of human pathogens. Annual Review of Ecology, Evolution and Systematics. 41: 231-250 pdf

Constantin de Magny G, Renaud F, Durand P & Guégan JF (2009) Health ecology: a new tool, the macroscope. Ecology and evolution of parasitism. Oxford University Press. (Eds. Thomas F, Guégan JF & Renaud F). pp 129-148 pdf

de Meeûs T, Guégan JF & Teriokhin AT (2009) MultiTest V.1.2, a program to binomially combine independent tests and performance comparison with other related methods on proportional data. BMC Bioinformatics. 10: 443

Field R, Hawkins BA, Cornell HV, Currie DJ, Diniz-Filho JAF, Guégan JF, Kaufman DM, Kerr JT, Mittelback GG, Oberdorff T, O'Brien EM & Turner JRG (2009) Spatial species-richness gradients across scales: a meta-analysis. Journal of Biogeography. 36: 132-147 pdf

Guernier V & Guégan JF (2009) May Rapoport's Rule Apply to Human Associated Pathogens? Ecohealth. 6: 509-521

Mbaye M, Mahé G, Servat E, Laganier R, Bigot S, Diop O & Guégan JF (2009) Ressources en eau et santé publique au Sahel : exemple de la propagation des maladies infectieuses à Saint-Louis (Sénégal). Secheresse. 20: 161-170 pdf

Michalakis Y (2009) Parasitism and the evolution of life-history traits. In Ecology and evolution of parasitism. Eds. Thomas F, Guégan JF & Renaud F. pp. 19-30. Oxford University Press, Oxford.

Philippon S, Broutin H, Constantin de Magny G, Toure K, Diakite CH, Fourquet N, Courel MF, Sultan B & Guégan JF (2009) Meningococcal meningitis in Mali: a long-term study of persistence and spread. International Journal of Infectious Diseases. 13: 103-109 pdf

Planade B, Lena JP, Li H, Plenet S, Guégan JF, Thomas F, Hurtrez-Boussès S, Renaud F & Joly P (2009) Tracking a heterosis effect in the field: tadpole resistance to parasites in the water frog hybridogenetic complex. Parasitology. 136: 1003-1013 pdf

Prugnolle F & Chevillon C (2009) Evolution adaptative des pathogènes, identification des mécanismes et conséquences épidémiologiques. In Introduction à l'épidémiologie intégrative des maladies infectieuses et parasitaire. (Eds. Guégan J & Choisy M). pp. 311-345. de Boeck.

Roche B, Lebarbenchon C, Gauthier-Clerc M, Chang CM, Thomas F, Renaud F, van der Werf S & Guégan JF (2009) Water-borne transmission drives avian influenza dynamics in wild birds: The case of the 2005-2006 epidemics in the Camargue area. Infection, Genetics and Evolution. 9: 800-805 pdf

Brou T, Broutin H, Elguero E, Asse H & Guégan JF (2008) Landscape diversity related to Buruli ulcer disease in Cote d'Ivoire. PLoS Neglected Tropical Diseases. 2: e271 pdf

Constantin de Magny G, Renaud F, Durand P, Guégan JF (2008) Ecology of health: the macroscope as a new tool! In Ecology and Evolution of Parasitized Systems. Eds F Thomas, JF Guègan & F Renaud. pp.129-138 Oxford University Press

Guégan JF & Broutin H (2008) Microbial communities: Patterns and processes. In Biodiversity Change and Human Health: From Ecosystem Services to Spread of Disease. (Eds. Sala O, Meyerson LA & Parmesan C). Island Press-Scope Diversitas, New York, USA. pp193-210

Guégan JF (2008) We all as humans stay at the parasites' place which in turn reside in us! Review of Infectious Disease Ecology: Effects of Ecosystems on Disease and of Disease on Ecosystems (Eds. RS Ostfeld, F Keesing & VT Eviner). Parasites & Vectors. 1: 28 pdf

Guernier V, Sola C, Brudey K, Guégan JF & Rastogi N (2008) Use of cluster-graphs from spoligotyping data to study genotype similarities and a comparison of three indices to quantify recent tuberculosis transmission among culture positive cases in French Guiana during a eight year period. BMC Infectious Diseases. 8: 46 pdf

Joly P, Guesdon V, Fromont E, Plenet S, Grolet O, Guégan JF, Hurtrez-Boussès S, Thomas F & Renaud F (2008) Heterozygosity and parasite intensity: lung parasites in the water frog hybridization complex. Parasitology. 135: 95-104

Morand S & Guégan JF (2008) How the biodiversity sciences may aid biological tools and ecological engineering to assess the impact of climate changes. Revue scientifique et technique de l Office internataional des Epizooties. 27: 355-366 pdf

Roche B, Guégan JF & Bousquet F (2008) Multi-agent systems in epidemiology: a first step for computational biology in the study of vector-borne disease transmission. BMC Informatics. 9: 435

Broutin H, Philippon S, Constantin de Magny G, Courel MF, Sultan B & Guégan JF (2007) Comparative study of meningitis dynamics across nine African countries: a global perspective. International Journal of Health Geographics. 6: 29 pdf

Cazelles B, Chavez M, Constantin de Magny G, Guégan JF, Hales S (2007) Time-dependent spectral analysis of epidemiological time-series with wavelets. Journal of the Royal Society Interface. 4: 625-636. pdf

Choisy M, Guégan JF & Rohani P (2007) Mathematical Modeling of Infectious Diseases Dynamics. In Encyclopedia of infectious diseases: Modern methodologies (Ed. Tibayrenc M). John Wiley & Sons,Inc. pdf

Constantin de Magny G, Guégan JF, Petit M & Cazelles B (2007) Regional-scale climate-variability synchrony of cholera epidemics in West Africa. BMC Infectious Diseases. 7: 20 pdf

Guégan JF & Constantin de Magny G (2007) Epidemiology in a changing world: the need for a bigger picture! In Encyclopedia of infectious diseases: Modern methodologies. Ed. M Tibayrenc. John Wiley & Sons, inc. pp. 569-589 pdf

Guégan JF, Constantin de Magny G, Durand P & Renaud F (2007) Ecologie de la Santé: Le macroscope comme nouvel outil ! In Ecologie et évolution des systèmes parasites (Eds. Thomas F, Renaud F & Guégan JF). De Boeck Université, Paris, France. pdf

Guégan JF, Prugnolle F & Thomas F (2007) Global spatial patterns of infectious diseases and human evolution. In: Evolution in Health and Disease. Edited by Stearns SC, Koella J. Oxford, UK: Oxford University Press; p. 19-29 pdf

Lebarbenchon C, Poulin R & Thomas F (2007) Parasitisme, Biodiversité et Biologie de la Conservation. In: Ecologie et évolution des systèmes parasites (Eds. Thomas F, Renaud F & Guégan JF). De Boeck Université, Bruxelles: Belgium.

Lebarbenchon C, van der Werf S, Thomas F, Aubin J-T, Azebi S, Cuvelier F, Jeannin P, Roca V, Chang C-M, Kayser Y, Roche B, Guégan JF, Renaud F & Gauthier-Clerc M (2007) Absence of detection of highly pathogenic H5N1 in migratory waterfowl in southern France in 2005-2006. Infection, Genetics and Evolution. 7: 604-608 pdf

Michalakis Y (2007) Parasitisme et évolution des traits d'histoire de vie. In Ecologie et évolution des systèmes parasites. (Eds. Thomas F, Guégan JF & Renaud F) de Boeck, Bruxelles pdf

Nettle D, Grace JB, Choisy M, Cornell HV, Guégan JF & Hochberg ME (2007) Cultural diversity, economic development and societal instability. PLoS One. 9: e929 pdf

Smith KF, Sax DF, Gaines SD, Guernier V & Guégan JF (2007) Globalization of human infectious disease. Ecology. 88: 1903-1910 pdf

Teriokhin AT, de Meeûs T & Guégan JF (2007) On the power of some binomial modifications of the Bonferroni multiple test. Journal of General Biology. 68: 332-340 pdf

Thomas F, Guégan JF & Renaud F (2007) Ecologie et évolution des systèmes parasites. De Boeck Université, Bruxelles: Belgium pdf

Brou TY, Broutin H, Dosso M & Guégan JF (2006) Impact des modifications d'habitats (déforestation, aménagements hydro-agricoles, extension des cultures) sur la santé des populations rurales : cas de l'ulcère de Buruli en Côte d'Ivoire.Proceedings of the Fifth FRIEND World Conference held at La Havana, Cuba, November 2006, IAHS Publ. 308: 685-690. pdf

Choisy M, Guégan JF & Rohani P (2006) Dynamics of infectious diseases and pulse vaccination: teasing apart the embedded resonance effects. Physica D. 223: 26-35 pdf

Constantin de Magny G, Cazelles B & Guégan JF (2006) Cholera threat to humans in Ghana is influenced by both global and regional climatic variability. Ecohealth. 3: 223-231 pdf

Constantin de Magny G, Guégan JF, Petit M & Cazelles B (2006) Regional-scale synchrony of cholera epidemics in western Africa with climate variability. Epidemiology. 17: S207-S207

Cumming GS & Guégan JF (2006) Food Webs and Disease: Is a pathogen diversity limited by vector diversity? Ecohealth. 3: 1-8 pdf

Doumenge F, Guégan JF, Hyunh F & Chevillon C (2006) Un observatoire régional de la santé en Guyane Françiase. Sciences au Sud. 35: 10

Guégan JF (2006) Do parasite organisms have biogeographies? Global Ecology and Biogeography. 15: 319-320 pdf

Guernier V, Guégan JF & Deparis X (2006) An evaluation of the actual incidence of tuberculosis in French Guiana using a capture-recapture model. Microbes and Infection. 8: 721-727 pdf

Broutin H, Guégan JF, Elguero E, Simondon F & Cazelles B (2005) Large-scale comparative analysis of pertussis population dynamics: periodicity, synchrony, and impact of vaccination. American Journal of Epidemiology. 161: 1159-1167 pdf

Broutin H, Mantilla-Beniers N, Simondon F, Aaby P, Grenfell BT, Guégan JF & Rohani P (2005) Epidemiological impact of vaccination on the dynamics of two childhood diseases in rural Senegal. Microbes and Infection. 7: 593-599 pdf

Constantin de Magny G, Paroissin C, Cazelles B, de Lara M, Delmas JF & Guégan JF (2005) Modeling environmental impacts of plankton reservoirs on cholera population dynamics. In ESAIM Proceedings 14: 156-173 pdf

Guégan JF [Epstein PR, Patz R, Ostfeld RS, Lannou C, Desprez-Loustau ML, Rohani P, Gonzalez JP & Hugot JP] (2005) Biodiversity and Health: Perspectives for the Future. In Proceedings of session 8: Biodiversity. Science and Gouvernance pp. 200-204 (Ed. R. Barbault). Proceedings of the International Conference at UNESCO, Paris January 24-28 pdf

Guégan JF, Morand S & Poulin R (2005) Are there general laws in parasite community ecology? The emergence of spatial parasitology and epidemiology. In Parasitism and ecosystems (Eds. Thomas F, Renaud F, Guégan JF). Oxford University Press, Oxford, UK pdf

Prugnolle F, Manica A, Charpentier M, Guégan JF, Guernier V & Balloux F (2005) Pathogen-driven selection and worldwide HLA class I diversity. Current Biology. 15: 1022-1027 [-supplimental data-] pdf

Renaud F, de Meeûs T & Read A (2005) Parasitism in man-made environments pg 155-170. In Parasitism and ecosystems (Eds Thomas F, Renaud F & Guégan JF) Oxford University Press.

Sultan B, Labadi K, Guégan JF & Janicot S (2005) Climate drives the meningitis epidemics onset in West Africa. PLoS Medicine. 2: 43-49 [-perspective-] pdf

Thomas F, Renaud F & Guégan JF (Eds) (2005) Parasitism and ecosystems. Oxford University Press. Oxford, UK

Truc P, Jammoneau V, Guégan JF (2005) Confirmation of the use of latex IgM on cerebrospinal fluid for improving stage determination of human African Trypanosomiasis. African Journal of technology. 4: 517-521 pdf

Barbault R, Guégan JF, Hoshi M, Mounolou JC, Van Baalen M, Wake M & Younes T (2004) Integrative Biology and complexity of natural systems. Biology International. 44: 6-12

Broutin H, Elguero E, Simondon F & Guégan JF (2004) Spatial dynamics of pertussis in a small region of Senegal. Proceedings of the Royal Society of London, Series B 271: 2091-2098 pdf

Broutin H, Rohani P, Guégan JF, Grenfell BT & Simondon F (2004) Loss of immunity to pertussis in a rural community in Senegal. Vaccine. 22: 594-596 pdf

Broutin H, Rohani P, Guégan JF, Grenfell BT & Simondon F (2004) Loss of imunity to pertussis in a rural community in Senegal (vol 22, pg594, 2004). Vaccine. 22: 1587-1587

Broutin H, Simondon F & Guégan JF (2004) Whooping cough metapopulation dynamics in tropical conditions: disease persistence and impact of vaccination. Proceedings of the Royal Society of London, Series B. 271 S5: S302-305 pdf

Choisy M, Hide M, Bañuls AL & Guégan JF (2004) Rocking the curve. Trends in Microbiology 12: 534-536 pdf

Choisy M, Woelk CH, Guégan J & Robertson D L (2004) Comparative study of adaptive molecular evolution in different human immunodeficiency virus groups and subtypes. Journal of Virology. 78: 1962-1970. [- erratum -] pdf

Currie DJ, Mittelbach GG, Cornell HV, Field R, Guégan JF, Hawkins BA, Kaufman DM, Kerr JT, Oberdorff T, O'Brien E & Turner JRG (2004) Predictions and tests of climate-based hypotheses of broad-scale variation in taxonomic richness. Ecology Letters. 7: 1121-1134 pdf

Duchene V, Ferdinand S, Filliol S, Guégan JF, Rastogi N & Sola C (2004) Phylogenetic reconstruction of Mycobacterium tuberculosis within four settings of the Caribbean region: tree comparative analysis and first appraisal on their phylogeography. Infection, Genetics and Evolution. 4: 5-14 pdf

Guégan JF & Renaud F (2004) Vers une écologie de la santé. In Biodiversité et Changements Globaux. pp. 100-135 (Eds. Barbault R, Chevassus-au-Louis B). ADPF/MAE, Paris, France. pdf

Guernier V, Hochberg ME & Guégan JF (2004) Ecology drives the worldwide distribution of human diseases. PLoS Biology 2: e141 [-synopsis-] pdf

Hurtrez-Boussès S, Durand P, Jabbour-Zahab R, Guégan JF, Meunier C, Bargues MD, Mas-Coma S & Renaud F (2004) Isolation and characterization of microsatellite markers in the liver fluke (Fasciola hepatica). Molecular Ecology. 4: 689-690 pdf

Teriokhin AT, Budilova EV, Thomas F & Guégan JF (2004) The worldwide variation in human sexual lifespan dimorphism and sex-specific environmental mortality rates Human Biology. 76: 623-641 pdf

Thomas F, Teriokhin AT, Budilova EV, Brown SP, Renaud F & Guégan JF (2004) Human birthweight evolution across contrasting environments Journal of Evolutionary Biology. 17: 542-553 pdf

Hawkins BA, Field R, Cornell HV, Currie DJ, Guégan JF, Kaufman DM, Kerr JT, Mittelbach GG, Oberdorff T, O'Brian EM, Porter EE & Turner JRG (2003) Energy, water, and broad-scale geographical patterns of species richness. Ecology. 84: 3105-3117 pdf

Leclerc MC, Thomas F & Guégan JF (2003) Evidence for the phylogenetic inheritance in pathogenicity of Mycobacterium. Antonie van Leeuwenhoek Journal of Microbiology. 83: 265-274 pdf

Pérez-Fuentes R, Guégan JF, Barnabé C, López-Colombo A, Salgado-Rosas H, Torres-Rasgado E, Briones B, Romero-Díaz M, Ramos-Jiménez J & Sánchez-Guillen MD (2003) Severity of chronic Chagas disease is associated with cytokine/antioxidant imbalance in chronically infected individuals. International Journal for Parasitology. 33: 293-299 pdf

Sanchez-Guillen MC, Guégan JF, Barnabé C, Tibayrenc M, Velasqueez-Rojas M, Martinez-Mungia J, Salgado-Rosas H, Torres-Rasgado E, Rosas-Ramirez MI & Pérez-Fuentes R (2003) Chronic infectious disease depend on inadaptable host homeostatic mechanisms ingenetically susceptible individuals. International Journal for Parasitology. 33: 293-299

Teriokhin AT, Thomas F, Budilova EV & Guégan JF (2003) The impact of environmental factors on human life history: an optimisation modelling and data analysis study. Evolutionary Ecology Research. 5: 1159-1162 pdf

Brown SP, Loot G, Teriokhin A, Brunel A, Brunel C & Guégan JF (2002) Host manipulation by Ligula intestinalis: a cause or consequence of parasite aggregation? International Journal for Parasitology. 32: 817-824 pdf

Loot G, Aulagnier S, Lek S, Thomas F & Guégan JF (2002) Experimental demonstration of a parasite Ligula intestinalis L. induced behavioural modification in a cyprinid fish Rutilus rutilus L. Canadian Journal of Zoology. 80: 738-744 pdf

Loot G, Poulin R, Lek S & Guégan JF (2002) The differential effects of Ligula intestinalis (L.) plerocercoids on host growth in three natural populations of roach, Rutilus rutilus (L.) Ecology of Freshwater Fish 11: 168-177 pdf

Sánchez-Guillén MC, Barnabé C, Guégan JF, Tibayrenc M, Velásquez-Rojas M, Martínez-Munguía J, Salgado-Rosas H, Torres-Rasgado E, Rosas-Ramírez MI & Pérez-Fuentes R (2002) High prevalence anti-Trypanosoma cruzi antibodies, among blood donors in the State of Puebla, a non-endemic area of Mexico. Memórias do Instituto Oswaldo Cruz. 97: 947-952 pdf

Brown SP, Loot G, Grenfell BT & Guégan JF (2001) Host manipulation by Ligula intestinalis: accident or manipulation. Parasitology. 123: 519-529

Brown SP, Renaud F, Guégan JF & Thomas F (2001) Evolution of trophic transmission in parasites: the need to reach a mating place? Journal of Evolutionary Biology. 14: 815-820 pdf

Guégan JF, Thomas F, Hochberg ME, de Meeûs T & Renaud F (2001) Disease diversity and human fertility. Evolution. 55: 1308-1314 pdf

Loot G, Brosse S, Lek S & Guégan JF (2001) Behaviour of roach (Rutilus rutilus L.) altered by Ligula intestinalis (Cestoda: Pseudophyllidea): a field demonstration. Freshwater Biology. 46: 1219-1227 pdf

Loot G, Brown SP, Lek S & Guégan JF (2001) Variation in morphology and asymmetry between uninfected and infected specimens of the Roach (Rutilus rutilus L.) by the parasite Ligula intestinalis L. (Cestoda: Pseudophyllidea). Journal of Parasitology. 87: 1002-1010

Loot G, Francisco P, Santoul F, Lek S & Guégan JF (2001) The three hosts of the Ligula intestinalis (Cestoda) life cycle in Lavernose-Lacasse gravel pit, France. Archiv für Hydrobiologie. 152: 511-525

Loot G, Lek S, Dejean D & Guégan JF (2001) Parasite-induced mortality in three host populations of the roach Rutilus rutilus (L.) by the tapeworm Ligula intestinalis (L.). International Journal of Limnology. 37: 151-159

Solano P, Guégan JF, Reifenberg J-M & Thomas F (2001) Trying to predict and explain the presence of African trypanosomes in tsetse flies. Journal of Parasitology. 87: 1058-1063

Thomas F, Renaud F, Benefice E, de Meeûs T & Guégan JF (2001) International variability of ages at menarche and menopause: patterns and main determinants. Human Biology. 73: 271-290 pdf

Dawson LH, Renaud F, Guégan JF & de Meeûs T (2000) Experimental evidence of asymmetrical competition between two species of parasitic copepods. Proceeding of the Royal Society of London, Series B. 267: 1973-1978 pdf

Guégan JF & Teriokhin AT (2000) Human life history traits on a parasitic landscape. Developments in Animal and Veterinary Sciences. 32: 143-161

Guégan JF, Teriokhin A & Thomas F (2000) Human fertility variation, size-related obstetrical performance and the evolution of sexual stature dimorphism. Proceedings of the Royal Society of London, Series B. 267: 2529-2536 pdf

Lek S & Guégan JF (2000) Artificial Neuronal Networks: Application to Ecology and Evolution. Springer-Verlag, Berlin, Germany

Morand S & Guégan JF (2000) Distribution and abundance of parasite nematodes: ecological specialisation, phylogenetic constraint or simply epidemiology? Oikos. 88: 563-573 pdf

Poulin R & Guégan JF (2000) Nestedness, anti-nestedness, and the relationship between prevalence and intensity in ectoparasite assemblages of marine fish: a spatial model of species coexistence. International Journal for Parasitology. 30: 1147-1152 pdf

Thomas F, Guégan JF, Michalakis Y & Renaud F (2000) Parasites and host life-history traits: implications for community ecology and species co-existence. International Journal for Parasitology. 30: 669-674 pdf

Thomas F, Poulin R, Guégan JF, Michalakis Y & Renaud F (2000) Are there pros as well as cons to being parasitized? Parasitology Today. 16: 533-536 pdf

Thomas F, Teriokhin A, Renaud F, de Meeûs T & Guégan JF (2000) Human longevity at the cost of reproductive success: evidence from global data. Journal of Evolutionary Biology. 13: 409-414

Trouvé S, Degen L, Meunier C, Tirard C, Hurtrez-Boussès S, Durand P, Guégan JF, Goudet J & Renaud F (2000) Microsatellites in the hermaphroditic snail, Lymnaea truncatula, intermediate host of the liver fluke, Fasciola hepatica. Molecular Ecology. 9: 1661-1686 pdf

Brosse S, Guégan JF & Lek S (1999) The use of artificial neural networks to assess fish abundance and spatial occupancy in the littoral zone of a mesotrophic lake. Ecological Modelling. 120: 299-311 pdf

de Garine-Wichatitsky M, de Meeûs T, Guégan JF & Renaud F (1999) Spatial and temporal distributions of parasites: can wild and domestic ungulates avoid African tick larvae? Parasitology. 119: 455-466

Lek S & Guégan JF (1999) Artificial Neural Networks as a tool in Ecological Modelling. An Introduction. Ecological Modelling. 120: 65-73 pdf

Oberdorff T, Lek S & Guégan JF (1999) Patterns of endemism in riverine fish of the Northern Hemisphere. Ecology Letters 2: 75-81

Thomas F, Poulin R, de Meeûs T, Guégan JF & Renaud F (1999) Parasites and ecosystem engineering: what roles could they play? Oikos. 84: 167-171

Guégan JF, Lek S & Oberdorff T (1998) Energy availability and habitat heterogeneity predict global riverine fish diversity. Nature. 391: 382-384 pdf

Rohde K, Worthen WB, Heap M, Hugueny B & Guégan JF (1998) Nestedness in assemblages of metazoan ecto- and endoparasites of marine fish. International Journal for Parasitology 28: 543-549 pdf

Guégan JF & Morand S (1997) Les modèles en biologie. Réponse à Daniel Schwartz. Pour la Science. 231: 7

Hugueny B & Guégan JF (1997) Community nestedness and the proper way to assess statistical significance by Monte-Carlo tests: some comments on Worthen and Rohde's (1996) paper. Oikos. 80: 572-574

Oberdorff T, Hugueny B & Guégan JF (1997) Is there an influence of historical events on contemporary fish species richness in rivers? Comparisons between Western Europe and North America. Journal of Biogeography. 24: 461-467 pdf

Sasal P, Morand S & Guégan JF (1997) Determinants of parasite species richness in Mediterranean marine fishes. Mar Ecol Prog Ser. 149: 61-71

Guégan JF & Kennedy CR (1996) Parasite richness/sampling effort/host range: The fancy three-piece jigsaw puzzle. Parasitol Today. 12: 367-370 pdf

Guégan JF & Morand S (1996) Polyploids hosts: strange attractors for parasites. Oikos. 77: 366-370

Kennedy CR & Guégan JF (1996) The number of niches in intestinal helminth communities of Anguilla anguilla: Are there enough spaces in fish for parasites? Parasitology. 113: 293-302

Guégan JF, Rab P, Machordom A & Doadrio I (1995) New evidence of hexaploidy in large Barbus with some considerations on the origin of hexaploidy. Journal of Fish Biology. 47: 192-198 pdf

Oberdorff T, Hugueny B & Guégan JF (1995) Global scale patterns of fish species richness in rivers. Ecography. 18: 345-352

Guégan JF & Hugueny B (1994) A nested parasite species subset pattern in tropical fish: host as major determinant of parasite infracommunity structure. Oecologia 100: 184-189

Kennedy CR & Guégan JF (1994) Regional versus local helminth parasite richness in British freshwater fish: saturated or unsaturated parasite communities? Parasitology. 109: 175-185

Teugels GG & Guégan JF (1994) Biological diversity of freshwater fishes of Lower Guinea and Central Africa. In: Biological diversity of African fresh- and brackish water fishes. Geographical overviews (Eds. Teugels GG, Guégan JF & Albaret J-J). Annales du Musée Royal de l'Afrique Centrale, Zoologie Tervueren, Belgique. pp. 67-85

Guégan JF & Kennedy CR (1993) Maximum local helminth parasite community richness in British fresh-water fish? A test of the colonization time hypothesis. Parasitology. 106: 91-100

Guégan JF, Lambert A, Leveque C, Combes C & Euzet L (1992) Can host body size explain the parasite species richness in tropical fresh-water fishes? Oecologia. 90: 197-204

Guégan JF & Agnese JF (1991) Parasite evolutionary events inferred from host phylogeny - the case of Labeo species (teleostei, cyprinidae) and their Dactylogyrid parasites (monogea, dactylogyridae). Canadian Journal of Zoology. 69: 595-603

Guégan JF & Lambert A (1991) Dactylogyrids (platyhelminthes, monogea) of Labeo (teleostei, cyprinidae) from West African coastal rivers. Journal of the Helminthological Society of Washington. 58: 85-99

Agnese JF, Berrebi P, Leveque C & Guégan JF (1990) Two lineages, diploid and tetraploid, demonstrated in African species Barbus (Osteichthyes, Cyprinidae). Aquatic Living Ressources. 3: 305-311

Berrebi P, Leveque C, Cattaneo-Barrebi G, Agnese JF, Guégan JF & Machordom A (1990) Diploid and tetraploid African Barbus (Osteichthyes, Cyprinidae): on the coding of differential gene expression. Aquatic Living Ressources. 3: 313-323

Guégan JF & Lambert A (1990) Twelve new species of Dactylogyrids (Platyhelminthes, Monogea) from West African Barbels (Teleostei, Cyprinidae), with some biogeographical implications. Systematic Parasitology. 17: 153-181

Leveque C & Guégan JF (1990) Les grands Barbus (Teleostei, Cyprinidae) d'Afrique de l'Ouest: révision systématique et parasitofaune branchiale. Revue d'Hydrobiologie tropicale. 23: 41-65

Paugy D, Guégan JF & Agnese JF (1990) Three simultaneous and independent approaches to the characterization of a new species of Labeo (Telostei, Cyprinidae) from West-Africa. Canadian Journal of Zoology . 68: 1124-1131

Guégan JF, Lambert A & Euzet L (1989) Etude des Monogènes des Cyprinidae du genre Labeo en Afrique de l'Ouest. I. Genre Dogielius Bykhowski, 1836. Revue d'Hydrobiologie tropicale. 22: 35-48

Paugy D & Guégan JF (1989) Note à propos de trois esèces d'Hydrocynus (Pisces, Characidae) du bassin du Niger suivie de la réhabilitation de l'espèce Hydrocynus vittatus (Castelnau, 1861). Revue d'Hydrobiologie tropicale 22: 63-69

Guégan JF, Lambert A & Birgi E (1988) Some observations on the branchial parasitism from characid fishes, genus Hydrocynus in West-Africa - description of a new species, annulotrema-pikoides N-SP (monogea, ancyrocephalidae) from hydrocynus-vittatus (Castelnau, 1861). Annales de Parasitologie Humaine et Comparée. 63: 91-98

Guégan JF, Lambert A & Euzet L (1988) Etudes des Monogènes des Cyprinidae du genre Labeo en Afrique de l'Ouest. I. Genre Dactylogyrus Diesing, 1850. Revue d'Hydrobiologie tropicale. 21: 135-151